#------------------------------------------------------------------------------
#$Date: 2017-10-13 07:28:26 +0200 (vie 13 de oct de 2017) $
#$Revision: 201972 $
#$URL: svn://www.crystallography.net/cod/cif/2/10/46/2104648.cif $
#------------------------------------------------------------------------------
#
# This file is available in the Crystallography Open Database (COD),
# http://www.crystallography.net/. The original data for this entry
# were provided by IUCr Journals, http://journals.iucr.org/.
#
# The file may be used within the scientific community so long as
# proper attribution is given to the journal article from which the
# data were obtained.
#
data_2104648
loop_
_publ_author_name
'Johnstone, Russell D. L.'
'Lennie, Alistair R.'
'Parsons, Simon'
'Pidcock, Elna'
'Warren, John E.'
_publ_section_title
;
 Comparison of the effects of pressure on three layered hydrates: a
 partially successful attempt to predict a high-pressure phase
 transition
;
_journal_issue                   6
_journal_name_full               'Acta Crystallographica Section B'
_journal_page_first              731
_journal_page_last               748
_journal_paper_doi               10.1107/S0108768109039469
_journal_volume                  65
_journal_year                    2009
_chemical_formula_moiety         'C5 H13 N1 O3'
_chemical_formula_sum            'C5 H13 N O3'
_chemical_formula_weight         135.16
_chemical_name_common            'Betaine monohydrate'
_space_group_IT_number           61
_symmetry_cell_setting           orthorhombic
_symmetry_space_group_name_Hall  '-P 2ac 2ab'
_symmetry_space_group_name_H-M   'P b c a'
_atom_sites_solution_hydrogens   geom
_atom_sites_solution_primary     direct
_cell_angle_alpha                90
_cell_angle_beta                 90
_cell_angle_gamma                90
_cell_formula_units_Z            8
_cell_length_a                   8.7873(10)
_cell_length_b                   10.710(2)
_cell_length_c                   11.8632(12)
_cell_measurement_reflns_used    627
_cell_measurement_temperature    293
_cell_measurement_theta_max      16
_cell_measurement_theta_min      3
_cell_volume                     1116.5(3)
_computing_cell_refinement       'Apex2 (Bruker AXS, 2006)'
_computing_data_collection       'Apex2 (Bruker AXS, 2006)'
_computing_data_reduction        'Apex2 (Bruker AXS, 2006)'
_computing_molecular_graphics    'CAMERON (Watkin et al., 1996)'
_computing_publication_material  'CRYSTALS (Betteridge et al., 2003)'
_computing_structure_refinement  'CRYSTALS (Betteridge et al., 2003)'
_computing_structure_solution    'SIR92 (Altomare et al., 1994)'
_diffrn_ambient_temperature      293
_diffrn_measured_fraction_theta_full 0.577
_diffrn_measured_fraction_theta_max 0.535
_diffrn_measurement_device       'Bruker Kappa Apex2'
_diffrn_measurement_device_type  Area
_diffrn_measurement_method       ω
_diffrn_radiation_monochromator  silicon
_diffrn_radiation_type           synchrotron
_diffrn_radiation_wavelength     0.47620
_diffrn_reflns_av_R_equivalents  0.1088
_diffrn_reflns_limit_h_max       11
_diffrn_reflns_limit_h_min       0
_diffrn_reflns_limit_k_max       9
_diffrn_reflns_limit_k_min       0
_diffrn_reflns_limit_l_max       14
_diffrn_reflns_limit_l_min       0
_diffrn_reflns_number            5075
_diffrn_reflns_reduction_process
;
 Merged with SORTAV
 R.H. Blessing, (1987) Cryst. Rev. 1, 3-58
;
_diffrn_reflns_theta_full        13.453
_diffrn_reflns_theta_max         17.471
_diffrn_reflns_theta_min         2.315
_diffrn_standards_number         0
_exptl_absorpt_coefficient_mu    0.131
_exptl_absorpt_correction_T_max  0.99
_exptl_absorpt_correction_T_min  0.78
_exptl_absorpt_correction_type   multi-scan
_exptl_absorpt_process_details   'SADABS (Siemens, 1996)'
_exptl_crystal_colour            colourless
_exptl_crystal_density_diffrn    1.608
_exptl_crystal_density_method    'not measured'
_exptl_crystal_description       block
_exptl_crystal_F_000             592
_exptl_crystal_size_max          0.20
_exptl_crystal_size_mid          0.20
_exptl_crystal_size_min          0.10
_refine_diff_density_max         0.47
_refine_diff_density_min         -0.52
_refine_ls_extinction_method     None
_refine_ls_goodness_of_fit_ref   1.0228
_refine_ls_hydrogen_treatment    constr
_refine_ls_matrix_type           full
_refine_ls_number_parameters     86
_refine_ls_number_reflns         429
_refine_ls_number_restraints     213
_refine_ls_R_factor_all          0.0994
_refine_ls_R_factor_gt           0.0606
_refine_ls_shift/su_max          0.000055
_refine_ls_structure_factor_coef F
_refine_ls_weighting_details
;
 Method= Modified Sheldrick
 w=1/[σ²(Fo) + ( 0.00P)² + 0.06P]
 ,where P=(max(Fo,0) + 2Fc)/3
;
_refine_ls_weighting_scheme      calc
_refine_ls_wR_factor_all         0.0936
_refine_ls_wR_factor_gt          0.0746
_refine_ls_wR_factor_ref         0.0746
_reflns_number_gt                429
_reflns_number_total             625
_reflns_threshold_expression     I>2.0σ(I)
_cod_data_source_file            ws5073.cif
_cod_data_source_block           BTM7.1GPa
_cod_depositor_comments
;
The following automatic conversions were performed:
'_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic'
according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic'
dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29.

Automatic conversion script
Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius 

The following automatic conversions were performed:

'_symmetry_cell_setting' value 'Orthorhombic' changed to
'orthorhombic' according to
/home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named
'cif_core.dic' version 2.4.1 from 2010-06-29.

Automatic conversion script
Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana 
;
_cod_original_cell_volume        1116.4(3)
_cod_original_sg_symbol_H-M      'P b c a '
_cod_original_formula_sum        'C5 H13 N1 O3'
_cod_database_code               2104648
_cod_database_fobs_code          2104648
loop_
_symmetry_equiv_pos_as_xyz
x,y,z
-x,-y,-z
-x+1/2,y+1/2,z
x+1/2,-y+1/2,-z
x,-y+1/2,z+1/2
-x,y+1/2,-z+1/2
-x+1/2,-y,z+1/2
x+1/2,y,-z+1/2
loop_
_atom_site_type_symbol
_atom_site_label
_atom_site_fract_x
_atom_site_fract_y
_atom_site_fract_z
_atom_site_U_iso_or_equiv
_atom_site_adp_type
_atom_site_occupancy
_atom_site_disorder_assembly
_atom_site_disorder_group
N N1 0.2425(3) 0.3185(3) 0.1110(2) 0.0127 Uani 1.0000 . .
O O1 0.0489(3) 0.1267(4) 0.3198(2) 0.0248 Uani 1.0000 . .
O O2 -0.0051(3) 0.1567(4) 0.1392(2) 0.0251 Uani 1.0000 . .
C C1 0.1159(4) 0.4106(5) 0.0969(3) 0.0201 Uani 1.0000 . .
C C2 0.2534(4) 0.2340(6) 0.0129(3) 0.0200 Uani 1.0000 . .
C C3 0.3883(4) 0.3876(5) 0.1208(3) 0.0200 Uani 1.0000 . .
C C4 0.2199(3) 0.2455(5) 0.2170(2) 0.0154 Uani 1.0000 . .
C C5 0.0749(3) 0.1702(5) 0.2242(2) 0.0162 Uani 1.0000 . .
H H1 0.0186 0.3660 0.0929 0.0242 Uiso 1.0000 . .
H H2 0.1314 0.4581 0.0273 0.0242 Uiso 1.0000 . .
H H3 0.1147 0.4678 0.1614 0.0242 Uiso 1.0000 . .
H H4 0.1594 0.1854 0.0064 0.0240 Uiso 1.0000 . .
H H5 0.3398 0.1773 0.0231 0.0240 Uiso 1.0000 . .
H H6 0.2683 0.2834 -0.0557 0.0240 Uiso 1.0000 . .
H H7 0.3838 0.4440 0.1857 0.0240 Uiso 1.0000 . .
H H8 0.4055 0.4362 0.0520 0.0240 Uiso 1.0000 . .
H H9 0.4720 0.3281 0.1310 0.0240 Uiso 1.0000 . .
H H10 0.3065 0.1870 0.2246 0.0184 Uiso 1.0000 . .
H H11 0.2205 0.3050 0.2808 0.0184 Uiso 1.0000 . .
O O3 0.2866(3) -0.0199(4) 0.3688(3) 0.0225 Uani 1.0000 . .
H H12 0.2090(17) 0.023(3) 0.355(4) 0.0761(11) Uiso 1.0000 . .
H H13 0.357(2) 0.0308(18) 0.356(3) 0.0761(11) Uiso 1.0000 . .
loop_
_atom_site_aniso_label
_atom_site_aniso_U_11
_atom_site_aniso_U_22
_atom_site_aniso_U_33
_atom_site_aniso_U_12
_atom_site_aniso_U_13
_atom_site_aniso_U_23
N1 0.0154(13) 0.007(3) 0.0154(14) 0.0008(11) 0.0022(10) -0.0003(14)
O1 0.0186(14) 0.028(4) 0.0276(13) -0.0021(13) 0.0006(11) 0.0097(18)
O2 0.0143(13) 0.031(4) 0.0300(14) -0.0048(14) -0.0035(9) 0.0034(18)
C1 0.0271(19) 0.009(4) 0.024(2) 0.0084(18) 0.0021(15) 0.001(2)
C2 0.0256(17) 0.014(4) 0.0205(17) 0.0015(19) 0.0046(14) -0.007(2)
C3 0.0233(18) 0.014(5) 0.023(2) -0.0083(17) 0.0012(14) -0.001(2)
C4 0.0156(15) 0.015(4) 0.0153(15) -0.0009(15) -0.0012(11) 0.0033(19)
C5 0.0140(17) 0.011(4) 0.0235(14) 0.0016(15) 0.0012(11) 0.001(2)
O3 0.0303(16) 0.008(4) 0.0287(16) 0.0014(15) -0.0031(12) 0.0004(19)
loop_
_atom_type_symbol
_atom_type_scat_dispersion_real
_atom_type_scat_dispersion_imag
_atom_type_scat_source
C 0.0000 0.0010 'International Tables Vol C 4.2.6.8 and 6.1.1.4'
H 0.0000 0.0000 'International Tables Vol C 4.2.6.8 and 6.1.1.4'
N 0.0010 0.0010 'International Tables Vol C 4.2.6.8 and 6.1.1.4'
O 0.0030 0.0030 'International Tables Vol C 4.2.6.8 and 6.1.1.4'
loop_
_geom_angle_atom_site_label_1
_geom_angle_atom_site_label_2
_geom_angle_atom_site_label_3
_geom_angle_site_symmetry_1
_geom_angle_site_symmetry_2
_geom_angle_site_symmetry_3
_geom_angle
_geom_angle_publ_flag
C1 N1 C2 . . . 111.3(2) yes
C1 N1 C3 . . . 108.8(3) yes
C2 N1 C3 . . . 108.1(2) yes
C1 N1 C4 . . . 109.9(2) yes
C2 N1 C4 . . . 110.6(3) yes
C3 N1 C4 . . . 108.1(2) yes
N1 C1 H1 . . . 109.5 no
N1 C1 H2 . . . 109.5 no
H1 C1 H2 . . . 109.5 no
N1 C1 H3 . . . 109.5 no
H1 C1 H3 . . . 109.5 no
H2 C1 H3 . . . 109.5 no
N1 C2 H4 . . . 109.5 no
N1 C2 H5 . . . 109.5 no
H4 C2 H5 . . . 109.5 no
N1 C2 H6 . . . 109.5 no
H4 C2 H6 . . . 109.5 no
H5 C2 H6 . . . 109.5 no
N1 C3 H7 . . . 109.5 no
N1 C3 H8 . . . 109.5 no
H7 C3 H8 . . . 109.5 no
N1 C3 H9 . . . 109.5 no
H7 C3 H9 . . . 109.5 no
H8 C3 H9 . . . 109.5 no
N1 C4 C5 . . . 116.1(2) yes
N1 C4 H10 . . . 107.8 no
C5 C4 H10 . . . 107.8 no
N1 C4 H11 . . . 107.8 no
C5 C4 H11 . . . 107.8 no
H10 C4 H11 . . . 109.5 no
C4 C5 O1 . . . 113.9(2) yes
C4 C5 O2 . . . 119.7(2) yes
O1 C5 O2 . . . 126.4(2) yes
H12 O3 H13 . . . 102.000(11) no
loop_
_geom_bond_atom_site_label_1
_geom_bond_atom_site_label_2
_geom_bond_site_symmetry_1
_geom_bond_site_symmetry_2
_geom_bond_distance
_geom_bond_publ_flag
N1 C1 . . 1.496(5) yes
N1 C2 . . 1.477(5) yes
N1 C3 . . 1.484(4) yes
N1 C4 . . 1.494(4) yes
O1 C5 . . 1.247(4) yes
O2 C5 . . 1.238(3) yes
C1 H1 . . 0.980 no
C1 H2 . . 0.980 no
C1 H3 . . 0.980 no
C2 H4 . . 0.980 no
C2 H5 . . 0.980 no
C2 H6 . . 0.980 no
C3 H7 . . 0.980 no
C3 H8 . . 0.980 no
C3 H9 . . 0.980 no
C4 C5 . . 1.510(4) yes
C4 H10 . . 0.990 no
C4 H11 . . 0.990 no
O3 H12 . . 0.84000(8) no
O3 H13 . . 0.84000(9) no
loop_
_cod_related_entry_id
_cod_related_entry_database
_cod_related_entry_code
1 ChemSpider 75635
